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1.
H9N2亚型禽流感病毒自1994年在中国首次发现以来,一直在家禽中流行,其导致的产蛋下降和发病死亡给养禽业发展带来严重危害。以前的研究发现中国的H9N2亚型禽流感病毒在进化过程中形成多个基因型,其表面抗原蛋白血凝素基因(HA)可被划分为以A/chicken/Beijing/1/94、A/quail/Hong Kong/G1/97(G1)和A/chicken/Heilongjiang/35/01等为代表的3个亚群,神经氨酸酶基因(NA)可被划分为以A/chicken/Beijing/1/94、A/quail/Hong Kong/G1/97(G1)和A/chicken/Hong Kong/G9/97(G9)等为代表的3个亚群。其中类G1病毒的HA基因只在香港分离株中出现。本研究对我国2003年～2004年从禽类中分离的H9N2亚型禽流感病毒血凝素(HA)和神经氨酸酶(NA)基因进行测定和遗传演化分析,结果表明其中11株病毒的HA基因属于CK/BJ/1/94群系,NA基因属于CK/BJ/1/94或DK/HK/G9/97群系,并首次发现两株病毒含有类G1病毒HA和NA基因,而且这些类G1病毒具有不同的抗原性以及人流感病毒的受体结合位点。本研究结果提示应对H9N2病毒的防治及其公共卫生意义予以高度重视。 相似文献
2.
本研究于2011年－2014年在我国部分省区鸡群中鉴定出49株 H9N2亚型禽流感病毒,并对所有毒株的 HA 基因进行克隆、测序及序列分析。结果表明,49个毒株的 HA 基因开放阅读框全长均为1683 bp,编码560个氨基酸。所有分离株均属于以 HK/Y280/97株为代表的 H9．4．2谱系,并明显分成2个亚分支(H9．4．2．5和 H9．4．2．6)。分离株 HA 基因核苷酸同源性在87．1％~100％之间,与疫苗株 SH/F/98株、GD/SS/94株和 SD/6/96株核苷酸同源性在89．4％~92．5％之间。对 HA 基因的推导氨基酸序列分析表明,所有分离株裂解位点附近没有连续的碱性氨基酸插入,符合低致病力毒株特征,受体结合位点为PWTN?LY 形式,受体结合位点左沿为 NGLM/QGL 形式,右沿均为 GTSKA 形式。在49个分离株中共发现10个潜在糖基化位点,但只有6个糖基化位点保守。研究表明,近年来 H9N2亚型禽流感在我国多个地区流行,2013年以后流行毒株趋势以 H9．4．2．5为主,但病毒基因仍在不断发生变异,因此需要继续加强对H9N2亚型禽流感分子流行病学的监控。 相似文献
3.
Ali Reza Homayounimehr Habibollah Dadras Abdolhamid Shoushtari Seyyed Ali Pourbakhsh 《Tropical animal health and production》2010,42(6):1291-1297
To determine the genetic relationship of Iranian viruses, the haemagglutinin (HA) genes from ten isolates of H9N2 viruses
isolated from commercial chickens in Iran during 1998–2002 were amplified and sequenced. Sequence analysis and phylogenetic
studies were conducted by comparing each isolate with those of the available H9N2 strains at GenBank. All these ten isolates
had the same sequence –R-S-S-R/G-L– of proteolytic cleavage site of the HA. Nucleotide sequence comparisons of HA gene from
Iranian isolates showed 95.2–99.1% identity within the group. Five isolates had leucine (L) at position 226 instead of glutamine
(Q). Phylogenetic analysis showed that all our isolates belonged to the G1-like sublineage. Also these isolates showed some
degree of homology with other H9N2 isolates e.g., 94.3–96.9% with qu/HK/G1/97, 96.1–98.6% with pa/Chiba/1/97, 95.6–98.2% with
pa/Narita/92A/98, and 94.0–96.3% with HK/1073/99. On the basis of phylogenetic and molecular characterization evidence, we
concluded that the H9N2 subtype influenza viruses circulating in chicken flocks in Iran since 1998–2002 had a common origin.
The results of this study indicated that all Iranian viruses have the potential to emerge as highly pathogenic influenza virus,
and considering the homology of these isolates with human H9N2 strains, it seems that the potential of these avian influenza
isolates to infect human should not be overlooked. 相似文献
4.
为了解中国目前H9N2亚型禽流感病毒(avian influenza virus,AIV)血凝素(HA)基因的遗传变异情况,对中国不同地区分离的10株H9N2亚型AIV的HA基因进行扩增、克隆和测序,并对所获得的HA全序列进行同源性和遗传进化分析。结果表明,10个分离株的裂解位点均为RSSR↓GLF,符合低致病性AIV的分子特征;10个分离株有7~9个潜在糖基化位点,由于基因突变有些HA基因出现了新的糖基化位点;与参考株相比,发现了4个抗原表位的突变,这些表位的突变可能引起病毒致病性的改变;受体结合位点除198位有变异外,其他位点均较保守;6株病毒234位氨基酸均为L,具有与哺乳动物唾液酸α,2-6受体结合的特征;10个分离株HA基因与国内疫苗株的核苷酸及氨基酸序列同源性分别为90.4%~99.2%和92.2%~98.7%;10个分离株同属于欧亚谱系中的A/duck/Hong Kong/Y280/97群,但差异显著,为此本试验又将其分为4个不同的亚群。人工感染排毒试验结果表明,BJ15和NJ17分离株在鸡体内具有较强的复制能力,排毒周期较长且排毒量也较大,而S145N的漂变导致在145-147位氨基酸多出1个糖基化位点NGT,可能是分离株复制能力增强的原因。 相似文献
5.
为明确3株不同源性的H9N2亚型禽流感病毒(AIV)A/Chicken/Jilin/22/13(简称JL22)、A/Chicken/Jilin/24/13(简称JL24)、A/Duck/Jilin/37/13(简称JL37)基因组的遗传变异情况,本试验采用RT-PCR技术,分别扩增出3株AIV的8个基因片段,克隆后进行序列测定。结果显示,3株H9N2亚型AIV的主要致病基因均属于经典的欧亚种系。氨基酸比对发现JL22的HA氨基酸序列与A/Chicken/Hong Kong/G9/97和A/Duck/Hong Kong/Y280/97的HA氨基酸序列相比,在551位多了1个潜在糖基化位点。JL22、JL24、JL37的HA序列,在226位的氨基酸残基均为Leu,具有同哺乳动物唾液酸受体结合的特性,说明对人的感染性增强。M基因在31位上均发生了Asn取代Ser的现象,说明这些病毒对金刚烷胺产生了耐药性。由系统进化树可知3株毒株亲缘关系较远,各个基因所属分支也不具有统一性,且部分基因分别与鸡源、鸭源和猪源3种源性流感病毒株高度同源,推测这3株毒株是不同动物不同毒株经过长时间进化而发生自然重排的产物。 相似文献
6.
为了解近年来中国部分地区H9N2亚型禽流感病毒流行特点及遗传进化情况,利用RT-PCR方法扩增2012~2015年分离的17株H9N2亚型禽流感病毒的HA基因片段,并进行序列测定和遗传进化分析,同时对HA蛋白的裂解位点、受体结合位点和潜在的糖基化位点进行分析。结果显示,17株H9N2亚型禽流感病毒HA基因核苷酸和推导的氨基酸同源性分别为87%~100%和75%~100%,均属于Y280-like亚系毒株。HA基因裂解位点均为非连续碱性氨基酸,属于低致病力毒株。HA基因受体结合位点149、198、234和235位氨基酸存在变异,其中,16株分离毒株的234位氨基酸由Q突变为L,表现出人流感病毒受体结合特征。潜在糖基化位点分析结果显示,11株病毒在218位氨基酸处缺失1个糖基化位点,4株病毒在492位氨基酸处缺失1个糖基化位点,17株病毒在313位氨基酸处增加1个糖基化位点。研究结果表明,应加强对H9N2亚型AIV的流行病学监测,关注疫苗毒株与流行毒株的差异。 相似文献
7.
Despite extensive vaccination, H9N2 subtype influenza A viruses (IAVs) have prevailed in chicken populations in China. H9N2 IAVs have been a major cause of respiratory disease and reduced egg production, resulting in great economic losses to the Chinese poultry industry. In attempt to find reasons for lack of adequate protection by commercial vaccines, 41 H9N2 viruses isolated from chicken flocks in various regions of China through surveillance between 1998 and 2007 were systemically analyzed using molecular and serological methods in comparison to IAV Ck/Shandong/6/96 and Ck/Shanghai/F/98 that have been used in a majority of commercial vaccines for H9N2 in China since 1998. The analyses showed that the field isolates were predominantly of Beijing/94 lineage and underwent rapid genetic and antigenic changes, forming several antigenic groups. Comparisons between the field isolates and vaccine strains revealed that a majority of the field isolates examined were antigenically distinct from the vaccine strains to some extent. Therefore, the rapid antigenic evolution of H9N2 IAV and resulting antigenic difference from the earlier vaccine strains appears to be a key factor for suboptimal control of H9N2 IAV in China, emphasizing that the vaccine strain should be updated in a timely manner through surveillance and accompanying laboratory evaluation of contemporary viruses for antigenic similarity with existing vaccine strains. 相似文献
8.
Soltanialvar M Shoushtari H Bozorgmehrifard M Charkhkar S Akbarnejad F 《Tropical animal health and production》2012,44(3):419-425
A total of 512 tissue samples collected from 30 farms located in various states of Iran during 2008–2009 as part of a program
to monitor avian influenza viruses (AIVs) infection in Iran’s poultry population. To determine the genetic relationship of
Iranian viruses, neuraminidase (NA) genes from ten isolates of H9N2 viruses isolated from commercial chickens in Iran during
2008–2009 were amplified and sequenced. The viruses’ neuraminidase gene was >90% similar to those of A/Quail/Hong Kong/G1/97
(H9N2) sublineage. The neuraminidase stalk regions in these Viruses had no deletion as compared to that of chicken/Beijing/1/94
sublineage (Beijing-like viruses) and the two human isolates A/HK/1073/99, A/HK/1074/99. Phylogenetic analysis of neuraminidase
(NA) gene showed that it shares a common ancestor A/Quail/Hong Kong/G1/97 isolate which had contributed the internal genes
of the H5N1 virus. The results of this study indicated that No (Beijing-like) virus and (Korean-like) virus were found in
chickens in Iran, and the NA genes of H9N2 influenza viruses circulating in Iran during the past years were well conserved
and the earlier Iranian isolates may be considered to represent such a progenitor. 相似文献
9.
为进一步了解福建省H9N2亚型禽流感病毒的基因遗传进化关系,本研究将福建省2011年分离的毒株FZ-04、FZ-11与GenBank上登录的2000～2011年福建省分离的H9N2毒株及国内外典型代表株进行HA、NA基因的序列比对和遗传进化分析。结果表明,分离株FZ-04和FZ-11的HA基因与CK/FJ/G9/09株核苷酸同源性最高,属于国内常见的CK/BJ/1/94亚系。HA裂解位点处的氨基酸序列为-PSRSSR/GL-,符合低致病性禽流感病毒的分子特征。NA基因在遗传进化关系上呈现独立的分支,与CK/FJ/10954/05毒株核苷酸序列同源性最高,属于CK/HK/G9/97亚系,且NA基因推导的469个氨基酸序列中没有缺失。同时,从HA和NA基因的遗传进化树上可知,2000～2011年福建省H9N2禽流感病毒进化相对比较稳定,可能有一个共同的起源。 相似文献
10.
近年来中国H9亚型禽流感分离株谱系分析 总被引：7，自引：0，他引：7
从GenBank中下载所有来自中国（含港、澳、台）的H9亚型禽流感病毒血凝素基因885条核苷酸序列（长度≥900bp）,用MEGA5.0软件进行谱系分析。结果表明我国近年来H9亚型禽流感病毒以第h9.4.2.5分支为主（代表株为A/chicken/Guangxi/55/2005）,而不是WHO新近报告所列出的4株病毒（A/Quail/HongKong/G1/97、A/chicken/HongKong/G9/97、A/duck/HongKong/Y280/97、A/HongKong/33982/2009）所代表的分支。此分析结果对于研制针对这一病毒感染的疫苗有重要指导意义。 相似文献
11.
为探究两广地区H9N2亚型禽流感病毒（avianinfluenzavirus,AIV）的变异情况及分子流行规律,于2011-2012年从该地区发病鸡群中共分离到16株H9N2亚型A1V,并对分离株HA基因进行测序与进化分析。结果表明,分离株HA基因开放阅读框全长均为1683bp,编码560个氨基酸;HA基因核苷酸同源性为88．7％～99．6％,编码氨基酸同源性为91．8％～99．5％。本试验分离毒株与国内疫苗株（GD-SS、SH—F和SD-6）的核苷酸同源性在90．1％～92．6％之间,推导的氨基酸序列同源性在91．6％～94．8％之间。进化分析显示分离株可分为Group1和Group2两个亚分支,与疫苗株均属于欧亚谱系的Y280分支,但亲缘关系较远。分离株HA蛋白裂解位点附近序列有3种形式：PARSSR＋GLF、PSRSSR＋GLF和PARLSR0GLF,均无连续碱性氨基酸的插A,符合低致病性AIv的特征。本试验发现分离株GD4、GX2在HA1的127、295位分别增加一个潜在的糖基化位点;除分离株GD5和GD6外,其余分离株在HAl的216位发生Q216L氨基酸突变,表明其存在感染人的可能性。 相似文献
12.
13.
Nagarajan S Rajukumar K Tosh C Ramaswamy V Purohit K Saxena G Behera P Pattnaik B Pradhan HK Dubey SC 《Veterinary microbiology》2009,133(1-2):154-163
A total of 1246 faecal and tissue samples collected/received from 119 farms located in various states of India were processed for isolation of avian influenza viruses (AIV) during 2003-2004 as part of a program to monitor AIV infection in Indian poultry population. Avian influenza virus was isolated for the first time in India from poultry farms with history of drop in egg production, respiratory illness and increased mortality in Haryana state. A total of 29 H9N2 AIV isolates were obtained from the states of Punjab, Haryana, Uttar Pradesh, Gujarat, and Orissa and Union Territory Delhi. Subtyping was done by HI, RT-PCR and neuraminidase inhibition assay. Pathotyping of six representative isolates by intravenous pathogenicity index (0.0/3.0) in 6-8 weeks old chicken, trypsin dependency in cell culture and HA cleavage site analysis (335RSSR*GLF341) confirmed that these isolates are low pathogenic. Nucleotide sequence analysis of the HA gene showed that the Indian isolates are very closely related (95.0-99.6%) and shared a homology of 92-96% with H9N2 isolates from Germany and Asian regions other than that of mainland China. Deduced amino acid sequences showed the presence of L226 (234 in H9 numbering) which indicates a preference to binding of alpha (2-6) sialic acid receptors. Two of the six isolates had 7 glycosylation sites in the HA1 cleaved protein and the remaining four had 5 sites. Phylogenetic analysis showed that they share a common ancestor Qa/HK/G1/97 isolate which had contributed internal genes of H5N1 virus circulating in Vietnam. Further characterization of Indian H9N2 isolates is required to understand their nature and evolution. 相似文献
14.
在2019年1月-2019年6月对云南出现呼吸道疫病的57个鸡场进行H9亚型禽流感检测的基础上,选取石林和楚雄2个H9亚型禽流感阳性样品进行病毒分离。从分离的H9N2亚型禽流感病毒感染鸡胚尿囊液中提取总RNA,采用特异性引物经反转录PCR分别扩增HA和NA基因,PCR产物纯化后进行测序。序列比对及系统发育分析结果表明,云南2株H9N2毒株HA基因核苷酸序列同源性为94.2%,NA基因核苷酸序列同源性为93.6%,系统进化分析表明云南H9N2亚型禽流感病毒HA和NA基因均属于欧亚谱系中的类ADKHKY28097分支（Y280-like）,ACKYN12019和ACKYN72019 HA基因之间的同源性为94.3%,与参考毒株ACKJX2448的同源性最高,为95.6%~98.5%,与中国流行的H9N2代表株和疫苗株同源性较低。HA蛋白333-340位裂解位点为PSRSSR↓GLF,具有低致病性禽流感病毒分子特征,受体结合位点均发生E198T和Q234L的突变,具有人样受体结合特征,在29、141、298、305、313、492位氨基酸有6个糖基化位点。ACKYN12019和ACKYN72019 NA基因同源性为93.6%,与Y280-like代表毒株的同源性分别为97.1%~97.5%和93.7%~94.6%,NA蛋白缺失63、64、65位氨基酸,在44、69、86、146、200、234位氨基酸处存在6个潜在的糖基化位点,NA蛋白红细胞结合（HB）位点分析发现,368-369、399-403、432位氨基酸处存在变异。研究结果显示,H9N2亚型禽流感病毒一直处于不断的变异之中,故应加强其监测与防控。 相似文献
15.
为了解上海市活禽市场H9N2亚型禽流感病毒(AIV)分离株的遗传变异情况,本研究对2019年分离的4株H9N2 AIV的8个基因节段进行PCR扩增、克隆和测序,并对获得的8个基因序列进行同源性以及基因进化分析,对与病毒适应性增加的关键氨基酸位点进行了分析,并和目前我国使用的H9N2流感疫苗毒株HA上的抗原位点进行了比较。结果:4个分离株的HA基因仍然属于Y280/97,8个基因节段的重组模式属于G57;裂解位点均为PSRSSR/GLF,符合低致病性AIV的分子特征;这4株病毒存在多个与适应性增加相关的氨基酸突变。在已报道的33个抗原位点中,这4株病毒与我国目前使用的2种H9N2禽流感疫苗毒株(A/chicken/Shandong/6/96(6/96)和A/chicken/Shanghai/F/98(F/98))相比较,最大差异18个抗原位点。以上研究为H9N2亚型AIV的防控和疫苗研制提供了科学参考。 相似文献
16.
13株H9N2亚型禽流感病毒HA基因变异分析 总被引：1，自引：0，他引：1
为了从分子水平上掌握我国H9亚型禽流感的病原变异情况和流行规律,本研究汇集近年来从我国部分省市养殖场分离的13株H9N2亚型禽流感毒株,采用RT-PCR技术对其HA基因进行扩增、克隆和测序,并对所得全序列进行同源性和遗传进化分析。结果显示,13株病毒的HA基因在遗传进化树中均属于欧亚分支中的类Y280-like亚分支,与A/DK/HK/Y280/97的HA基因核苷酸序列同源性为92.2%～97.6%,与中国最早的分离株A/Chicken/Beijing/1/94(简称BJ94)相距较远,初步说明H9亚型禽流感病毒随着流行时间而发生了遗传分化。推测的HA糖基化位点的氨基酸序列12株病毒均与上述亚系相似,但有一株病毒由于一个核苷酸的变异,缺失了HA上218～220位的一个潜在的糖基化位点。 相似文献
17.
为了解上海市活禽市场H9N2亚型禽流感病毒(AIV)分离株的遗传变异情况,本研究对2017年分离的6株H9N2 AIV的8个基因片段进行RT-PCR扩增、克隆和测序,并对获得的HA基因序列进行同源性和关键位点分析.结果显示:6个分离株的HA裂解位点均为RSSR↓GLF,符合低致病性AIV的分子特征;6株分离株均有8处糖基化位点;受体结合位点除198位和202位有变异外,其它位点均保守,226位氨基酸均为L,228位氨基酸均为G,因此具有与哺乳动物唾液酸α2-6受体结合的特征;所有分离株HA基因核苷酸同源性为93.4%~99.9%,氨基酸同源性为93.8%~99.5%,HA基因进化树显示上述6株分离株均属于近几年在中国鸡群中流行的h9.4.2.5分支;从8个基因片段组成方式分析这6个毒株属于G57基因型.本研究结果为H9N2亚型AIV的防控和疫苗研制提供了科学参考. 相似文献
18.
Shortridge KF Gao P Guan Y Ito T Kawaoka Y Markwell D Takada A Webster RG 《Veterinary microbiology》2000,74(1-2):141-147
This account takes stock of events and involvements, particularly on the avian side of the influenza H5N1 'bird flu' incident in Hong Kong SAR in 1997. It highlights the role of the chicken in the many live poultry markets as the source of the virus for humans. The slaughter of chicken and other poultry across the SAR seemingly averted an influenza pandemic. This perspective from Hong Kong SAR marks the coming-of-age of acceptance of the role of avian hosts as a source of pandemic human influenza viruses and offers the prospect of providing a good baseline for influenza pandemic preparedness in the future. Improved surveillance is the key. This is illustrated through the H9N2 virus which appears to have provided the 'replicating' genes for the H5N1 virus and which has since been isolated in the SAR from poultry, pigs and humans highlighting its propensity for interspecies transmission. 相似文献
19.
本试验对1株2010年从广东省分离的H9N2亚型禽流感病毒A/chicken/Guangdong/QY/2010(H9N2)的生物学特性进行研究并对其全基因组序列进行分析。结果显示,该毒株的鸡胚半数感染量 EID50为10－9/0.1 mL,鸡胚最小致死量的平均死亡时间MDT为104 h,脑内致病指数ICPI值为0.51,静脉致病指数IVPI为0。用RT-PCR方法扩增病毒的基因组各片段,将扩增片段进行克隆、测序并进行序列分析。结果显示,该毒株的HA基因与Ck/HK/G9/97和Dk/HK/Y280/97在同一分支上,HA的裂解位点为PARSSR↓GLF,有8个潜在糖基化位点,226位氨基酸残基为L,较保守的202位受体结合位点由L突变为P,该毒株的HA和NA核苷酸序列与Dk/HK/Y280/97同源性较高,NS、PA、PB1的核苷酸序列均与Ck/SH/F/98同源性较高,NP基因与A/VN/ 1203/04(H5N1)的核苷酸序列同源性为95.3%。 相似文献
20.
我国与韩国禽流感H9N2病毒血凝素分子特性的区别 总被引：4，自引：0，他引：4
中国与韩国都发生了H9N2亚型禽流感，且都对养禽业造成了严重损失。国际上有不少学者认为韩国的H9N2亚型流感是由中国通过禽肉及其相关产品的输入而引起。本研究针对这一情况对从中国大陆分离的H9N2病毒和自GeneBank读取的韩国H9N2病毒的血凝素核苷酸序列进行了比较分析，结果表明两者属于不同的进化分支。所有中国H9N2病毒的血凝素裂解位点都为-RSSR／G-，而韩国H9N2病毒的血凝素裂解位点为-ASVR／G-、-ASYR／G-或-ASGR／G-。韩国H9N2病毒血凝素的受体结合位点的氨基酸在第183、190和226位点分别H、E和Q；而中国毒株的变异较大，在第183位点全部为N，190位点为A、T或V，第226位点为L或Q。因此，中韩两国的H9N2病毒血凝素分子特性显著不同。 相似文献